BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E01SP1|AL428552
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1660 1566 0.0
>3x_Contig1660
Length = 13166
Score = 1566 bits (782), Expect = 0.0
Identities = 811/829 (97%)
Strand = Plus / Plus
Query: 1 ctttcgtcaagttaagagtagctcatcttacggagatatctccagtgatatacagaggcg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3572 ctttcgtcaagttaagagtagctcgtcttacggagatatctccagtgatatacagaggcg 3631
Query: 61 gccaaactccaaaatttgattaccattgtgtttttcaactaacgcccgatatcaagcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3632 gccaaactccaaaatttgattaccattgtgtttttcaactaacgcccgatatcaagcctc 3691
Query: 121 tactctgcgttgaacwatacgatgaccatgatcacaaacatggttcgaagctcattggga 180
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3692 tactctgcgttgaactgtacgatgaccatgatcacaaacatggttcgaagctcattggga 3751
Query: 181 agtgcgatgttgatcttttgcctgcattactaagtgaccctgaagaaggccatgataggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3752 agtgcgatgttgatcttttgcctgcattactaagtgaccctgaagaaggccatgataggt 3811
Query: 241 ggtatcatctgaagaggggtcctttggaagctggtaaggtgtatattgaattgacttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3812 ggtatcatctgaagaggggtcctttggaagctggtaaggtgtatattgaattgacttttg 3871
Query: 301 ttccaaatwacattagcgaagacagacgcgacaatgttccaaaaatwagttccagtgtac 360
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3872 ttccaaataacattagcgaagacagacgcgacaatgttccaaaaataagttccagtgtac 3931
Query: 361 agtccaggtcagtaccaccactaccgtcagatccaccggggttacatgcacaatatgawc 420
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 3932 agtccaggtcagtaccaccactaccgtcagatccaccggagttacatgcacaatatgaac 3991
Query: 421 tgcagacatcggctagtgagcwgcggttcgttgcttccgcatccccaggccaatacgttc 480
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3992 tgcagacatcggcaagtgagcagcggttcgttgcttccgcatccccaggccaatacgttc 4051
Query: 481 acggctctcatataaaatctccacttcctgatctacctataaacctcgatacttctagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4052 acggctctcatataaaatctccacttcctgatctacctataaacctcgatacttctagat 4111
Query: 541 catcacacgcttcaagtgaaagaatagattttnattcatcgatgggggctaatgctacag 600
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 4112 catcacacgcttcaagtgaaagaatagattttgattcatcgatggggtctaatgctacag 4171
Query: 601 caaatacctatcattcgcaacaaarccaatctactgatgggstgatggrcaagttaaagc 660
|||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 4172 caaatacctatcattcgcaacaaagccaatctactgatgggctgatggacaagttaaagc 4231
Query: 661 tgatcaaagaaaaattkamttatttcaagaacggctcctcggkaccatctacagagagta 720
|||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4232 tgatcaaagaaaaattgaattatttcaagaacggctcctcggtaccatctacagagagta 4291
Query: 721 tcaccaacactgcgatggrtttggaagtcttacagaaagtggtaggtggcggtctcgaga 780
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4292 tcaccaacactgcgatggatttggaagtcttacagaaagtggtaggtggcggtctcgaga 4351
Query: 781 gtagctcaagctcaagaataccaacgaacattgacgagccatcgcctat 829
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4352 gtagctcaagctcaagaataccaacgaacattgacgagccatcgcctat 4400
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4122
Number of Sequences: 1807
Number of extensions: 4122
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)